STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET61522.1Type VI secretion system protein VasL. (356 aa)    
Predicted Functional Partners:
SET60657.1
Type VI secretion system, EvfB, or VasL.
 
      0.900
SET61595.1
Type VI secretion system protein ImpH.
  
 
 0.846
SET61548.1
Type VI secretion system protein.
  
  
 0.682
SET61499.1
Type VI secretion system, EvfB, or VasL.
       0.639
SET55236.1
Type VI secretion system protein ImpC.
  
 
 0.573
SET61572.1
Type VI secretion system protein VasD.
  
  
 0.555
SET55217.1
Type VI secretion system protein ImpB.
  
 
 0.546
SET61672.1
Type VI secretion system protein ImpL.
  
 
 0.488
SET61618.1
Type VI secretion system protein ImpG.
  
  
 0.468
SET55268.1
Type VI secretion system protein ImpJ.
  
 
 0.430
Your Current Organism:
Thorsellia anophelis
NCBI taxonomy Id: 1123402
Other names: T. anophelis DSM 18579, Thorsellia anophelis DSM 18579
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.