STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF16676.1Hypothetical protein. (197 aa)    
Predicted Functional Partners:
SHF16724.1
Hypothetical protein.
 
     0.794
SHE29119.1
Hypothetical protein.
  
     0.771
SHE67858.1
Hypothetical protein.
  
     0.756
SHE76903.1
Germination protein M.
  
     0.753
SHE64887.1
PrcB C-terminal.
  
     0.750
SHE80215.1
TATA-box binding.
  
     0.750
SHE33151.1
Hypothetical protein.
  
     0.745
SHE74410.1
Lecithin:cholesterol acyltransferase.
  
     0.734
SHE29134.1
Hypothetical protein.
  
     0.732
SHE62182.1
Hypothetical protein.
  
     0.731
Your Current Organism:
Tissierella praeacuta
NCBI taxonomy Id: 1123404
Other names: T. praeacuta DSM 18095, Tissierella praeacuta DSM 18095
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.