STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ39239.1DNA-binding transcriptional regulator SgrR of sgrS sRNA, contains a MarR-type HTH domain and a solute-binding domain. (574 aa)    
Predicted Functional Partners:
SJZ44226.1
Plasmid transfer operon, TraF, protein.
  
     0.506
malT
LuxR family transcriptional regulator, maltose regulon positive regulatory protein; Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto- oligosaccharides. Specifically binds to the promoter region of its target genes, recognizing a short DNA motif called the MalT box.
  
     0.498
SKA16037.1
Tetratricopeptide repeat-containing protein.
  
     0.493
uspB
Universal stress protein B.
  
     0.492
SKA10236.1
Uncharacterized membrane protein YhhN.
  
     0.491
SKA21941.1
Hypothetical protein; Belongs to the UPF0265 family.
  
     0.490
SJZ43500.1
Uncharacterized protein, contains a von Willebrand factor type A (vWA) domain.
  
     0.477
SJZ84853.1
Threonine/homoserine efflux transporter RhtA.
  
     0.466
SJZ39292.1
Hypothetical protein.
       0.445
SJZ43483.1
MoxR-like ATPase.
  
     0.415
Your Current Organism:
Vibrio cincinnatiensis
NCBI taxonomy Id: 1123491
Other names: V. cincinnatiensis DSM 19608, Vibrio cincinnatiensis DSM 19608
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.