STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA28344.1Cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein. (330 aa)    
Predicted Functional Partners:
SKA28332.1
Cytochrome d ubiquinol oxidase subunit I.
 0.999
SJZ37678.1
Cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein.
 
 0.989
SJZ40343.1
ATP-binding cassette, subfamily C, CydD.
 
  
 0.779
SJZ40309.1
ATP-binding cassette, subfamily C, CydC.
  
  
 0.697
fliQ
Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
    
   0.639
flgH
Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
    
   0.639
SJZ64895.1
Succinate dehydrogenase subunit C.
     
 0.554
SJZ64761.1
Succinate dehydrogenase subunit B.
     
 0.534
SKA17665.1
Succinate dehydrogenase and fumarate reductase iron-sulfur protein.
     
 0.534
SJZ64796.1
Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
     
 0.521
Your Current Organism:
Vibrio cincinnatiensis
NCBI taxonomy Id: 1123491
Other names: V. cincinnatiensis DSM 19608, Vibrio cincinnatiensis DSM 19608
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.