STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426765_01891Unannotated protein. (554 aa)    
Predicted Functional Partners:
GCA_000426765_03110
Unannotated protein.
  
    0.683
GCA_000426765_03111
Unannotated protein.
  
  
 0.641
GCA_000426765_00135
Unannotated protein.
  
     0.630
GCA_000426765_00500
Unannotated protein.
  
    0.620
GCA_000426765_01456
Unannotated protein.
  
    0.603
GCA_000426765_03105
Unannotated protein.
  
    0.603
GCA_000426765_03113
Unannotated protein.
  
    0.603
GCA_000426765_01892
Unannotated protein.
 
     0.601
GCA_000426765_00581
Unannotated protein.
  
     0.587
GCA_000426765_00878
Unannotated protein.
  
     0.559
Your Current Organism:
Vibrio litoralis
NCBI taxonomy Id: 1123493
Other names: V. litoralis DSM 17657, Vibrio litoralis DSM 17657
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.