STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426765_02386Unannotated protein. (258 aa)    
Predicted Functional Partners:
GCA_000426765_02385
Unannotated protein.
 0.999
GCA_000426765_02388
Unannotated protein.
 
 
 0.993
GCA_000426765_00903
Unannotated protein.
 
 
 0.982
GCA_000426765_02387
Unannotated protein.
 
  
 0.973
GCA_000426765_02408
Unannotated protein.
 
 
 0.960
GCA_000426765_01091
Unannotated protein.
 
 
 0.906
GCA_000426765_02384
Unannotated protein.
 
 
 0.886
GCA_000426765_01266
Unannotated protein.
 
  
 0.814
GCA_000426765_00204
Unannotated protein.
    
 
 0.784
GCA_000426765_02223
Unannotated protein.
    
 
 0.784
Your Current Organism:
Vibrio litoralis
NCBI taxonomy Id: 1123493
Other names: V. litoralis DSM 17657, Vibrio litoralis DSM 17657
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.