STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426765_03266Unannotated protein. (460 aa)    
Predicted Functional Partners:
GCA_000426765_03265
Unannotated protein.
 0.999
GCA_000426765_00435
Unannotated protein.
   
  0.956
GCA_000426765_00108
Unannotated protein.
     
 0.774
GCA_000426765_01859
Unannotated protein.
     
 0.599
GCA_000426765_03086
Unannotated protein.
   
 
 0.581
GCA_000426765_01013
Unannotated protein.
    
  0.547
GCA_000426765_01858
Unannotated protein.
     
 0.545
GCA_000426765_03312
Unannotated protein.
    
  0.541
GCA_000426765_02639
Unannotated protein.
    
  0.540
GCA_000426765_01124
Unannotated protein.
     
 0.458
Your Current Organism:
Vibrio litoralis
NCBI taxonomy Id: 1123493
Other names: V. litoralis DSM 17657, Vibrio litoralis DSM 17657
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.