STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426765_03424Unannotated protein. (328 aa)    
Predicted Functional Partners:
GCA_000426765_02146
Unannotated protein.
      0.696
GCA_000426765_03364
Unannotated protein.
  
  
 0.679
GCA_000426765_03425
Unannotated protein.
     
 0.605
GCA_000426765_03423
Unannotated protein.
       0.584
GCA_000426765_02622
Unannotated protein.
   
 
  0.507
GCA_000426765_00136
Unannotated protein.
  
 
 0.490
GCA_000426765_02235
Unannotated protein.
  
    0.487
GCA_000426765_02553
Unannotated protein.
 
  
 0.480
GCA_000426765_03429
Unannotated protein.
   
   0.444
GCA_000426765_01064
Unannotated protein.
 
 
 0.434
Your Current Organism:
Vibrio litoralis
NCBI taxonomy Id: 1123493
Other names: V. litoralis DSM 17657, Vibrio litoralis DSM 17657
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.