STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000711795_00363Unannotated protein. (899 aa)    
Predicted Functional Partners:
GCA_000711795_01799
Unannotated protein.
  
 0.981
GCA_000711795_00166
Unannotated protein.
 
 
 0.956
GCA_000711795_02561
Unannotated protein.
  
 0.935
GCA_000711795_01629
Unannotated protein.
  
 0.929
GCA_000711795_03492
Unannotated protein.
  
 0.929
GCA_000711795_02218
Unannotated protein.
  
 
 0.924
GCA_000711795_02220
Unannotated protein.
  
 
 0.924
GCA_000711795_01014
Unannotated protein.
 
  
 0.916
GCA_000711795_02025
Unannotated protein.
   
 0.916
GCA_000711795_00209
Unannotated protein.
  
 
 0.915
Your Current Organism:
Vibrio pacinii
NCBI taxonomy Id: 1123494
Other names: V. pacinii DSM 19139, Vibrio pacinii DSM 19139
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.