STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000711795_01126Unannotated protein. (421 aa)    
Predicted Functional Partners:
GCA_000711795_00607
Unannotated protein.
     
 0.895
GCA_000711795_02625
Unannotated protein.
  
  
 0.868
GCA_000711795_01894
Unannotated protein.
  
  
  0.842
GCA_000711795_00945
Unannotated protein.
  
  
 0.825
GCA_000711795_00810
Unannotated protein.
     
 0.823
GCA_000711795_01016
Unannotated protein.
     
 0.823
GCA_000711795_00560
Unannotated protein.
     
 0.819
GCA_000711795_02517
Unannotated protein.
     
 0.809
GCA_000711795_03284
Unannotated protein.
     
 0.804
GCA_000711795_01099
Unannotated protein.
     
 0.800
Your Current Organism:
Vibrio pacinii
NCBI taxonomy Id: 1123494
Other names: V. pacinii DSM 19139, Vibrio pacinii DSM 19139
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.