STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000711795_01785Unannotated protein. (193 aa)    
Predicted Functional Partners:
GCA_000711795_00289
Unannotated protein.
  
 
   0.686
GCA_000711795_00331
Unannotated protein.
  
 
   0.675
GCA_000711795_03001
Unannotated protein.
    
   0.649
GCA_000711795_03168
Unannotated protein.
    
   0.649
GCA_000711795_02987
Unannotated protein.
   
 
 0.644
GCA_000711795_03739
Unannotated protein.
   
   0.643
GCA_000711795_02990
Unannotated protein.
    
   0.642
GCA_000711795_03738
Unannotated protein.
   
   0.641
GCA_000711795_01483
Unannotated protein.
   
   0.633
GCA_000711795_00466
Unannotated protein.
    
   0.628
Your Current Organism:
Vibrio pacinii
NCBI taxonomy Id: 1123494
Other names: V. pacinii DSM 19139, Vibrio pacinii DSM 19139
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.