STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000382305_00144Unannotated protein. (515 aa)    
Predicted Functional Partners:
GCA_000382305_00146
Unannotated protein.
 
    0.854
GCA_000382305_00147
Unannotated protein.
     
 0.808
GCA_000382305_00145
Unannotated protein.
       0.803
GCA_000382305_00149
Unannotated protein.
   
 0.785
GCA_000382305_01684
Unannotated protein.
  
   
 0.710
GCA_000382305_00148
Unannotated protein.
       0.693
GCA_000382305_00172
Unannotated protein.
 
   
 0.636
GCA_000382305_00730
Unannotated protein.
  
   
 0.617
GCA_000382305_01279
Unannotated protein.
  
   
 0.617
GCA_000382305_01369
Unannotated protein.
 
   
 0.580
Your Current Organism:
Vitreoscilla stercoraria
NCBI taxonomy Id: 1123499
Other names: V. stercoraria DSM 513, Vitreoscilla stercoraria DSM 513
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.