Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KIQ68394.1 | KIQ68395.1 | Wenmar_03041 | Wenmar_03042 | Hypothetical protein. | Glutathione S-transferase. | 0.486 |
KIQ68394.1 | KIQ68753.1 | Wenmar_03041 | Wenmar_02479 | Hypothetical protein. | Invasion protein B, involved in pathogenesis. | 0.446 |
KIQ68394.1 | KIQ69967.1 | Wenmar_03041 | Wenmar_01537 | Hypothetical protein. | Hypothetical protein. | 0.494 |
KIQ68394.1 | KIQ70949.1 | Wenmar_03041 | Wenmar_00325 | Hypothetical protein. | Murein endopeptidase. | 0.559 |
KIQ68395.1 | KIQ68394.1 | Wenmar_03042 | Wenmar_03041 | Glutathione S-transferase. | Hypothetical protein. | 0.486 |
KIQ68753.1 | KIQ68394.1 | Wenmar_02479 | Wenmar_03041 | Invasion protein B, involved in pathogenesis. | Hypothetical protein. | 0.446 |
KIQ69967.1 | KIQ68394.1 | Wenmar_01537 | Wenmar_03041 | Hypothetical protein. | Hypothetical protein. | 0.494 |
KIQ70949.1 | KIQ68394.1 | Wenmar_00325 | Wenmar_03041 | Murein endopeptidase. | Hypothetical protein. | 0.559 |