STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000382325_02553Unannotated protein. (158 aa)    
Predicted Functional Partners:
GCA_000382325_02554
Unannotated protein.
       0.735
GCA_000382325_00044
Unannotated protein.
 
      0.710
GCA_000382325_01867
Unannotated protein.
      0.643
GCA_000382325_02556
Unannotated protein.
     
 0.626
GCA_000382325_00062
Unannotated protein.
    
   0.594
GCA_000382325_02886
Unannotated protein.
    
   0.594
GCA_000382325_02552
Unannotated protein.
       0.574
GCA_000382325_02555
Unannotated protein.
  
  
 0.569
GCA_000382325_00726
Unannotated protein.
 
 
 0.480
GCA_000382325_00488
Unannotated protein.
    
 0.400
Your Current Organism:
Woodsholea maritima
NCBI taxonomy Id: 1123503
Other names: W. maritima DSM 17123, Woodsholea maritima DSM 17123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.