STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420805_00756Unannotated protein. (520 aa)    
Predicted Functional Partners:
GCA_000420805_02326
Unannotated protein.
    
  0.879
GCA_000420805_00714
Unannotated protein.
  
  
  0.847
GCA_000420805_01351
Unannotated protein.
  
0.792
GCA_000420805_02619
Unannotated protein.
  
 0.791
GCA_000420805_01300
Unannotated protein.
    
  0.753
GCA_000420805_02457
Unannotated protein.
    
  0.753
GCA_000420805_01941
Unannotated protein.
    
   0.732
GCA_000420805_02322
Unannotated protein.
    
   0.732
GCA_000420805_02340
Unannotated protein.
   
   0.731
GCA_000420805_02329
Unannotated protein.
    
   0.729
Your Current Organism:
Yaniella halotolerans
NCBI taxonomy Id: 1123507
Other names: Y. halotolerans DSM 15476, Yaniella halotolerans DSM 15476
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.