STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000255705_03109Unannotated protein. (277 aa)    
Predicted Functional Partners:
GCA_000255705_03108
Unannotated protein.
 
 
 0.998
GCA_000255705_00458
Unannotated protein.
  
 
 0.974
GCA_000255705_01227
Unannotated protein.
 
   
 0.934
GCA_000255705_01243
Unannotated protein.
  
 
 0.932
GCA_000255705_01894
Unannotated protein.
  
 
 0.929
GCA_000255705_05093
Unannotated protein.
    
 0.921
GCA_000255705_02675
Unannotated protein.
  
 
 0.867
GCA_000255705_07667
Unannotated protein.
 
    0.864
GCA_000255705_08432
Unannotated protein.
  
 
 0.864
GCA_000255705_00340
Unannotated protein.
  
 
 0.860
Your Current Organism:
Zavarzinella formosa
NCBI taxonomy Id: 1123508
Other names: Z. formosa DSM 19928, Zavarzinella formosa DSM 19928
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.