STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000255705_05424Unannotated protein. (447 aa)    
Predicted Functional Partners:
GCA_000255705_05416
Unannotated protein.
 
   
 0.799
GCA_000255705_07271
Unannotated protein.
 
     0.786
GCA_000255705_01553
Unannotated protein.
 
     0.785
GCA_000255705_05415
Unannotated protein.
 
   
 0.783
GCA_000255705_07272
Unannotated protein.
 
     0.774
GCA_000255705_05449
Unannotated protein.
 
   
 0.771
GCA_000255705_07263
Unannotated protein.
 
    0.770
GCA_000255705_01554
Unannotated protein.
 
     0.769
GCA_000255705_07274
Unannotated protein.
 
     0.763
GCA_000255705_01556
Unannotated protein.
 
     0.755
Your Current Organism:
Zavarzinella formosa
NCBI taxonomy Id: 1123508
Other names: Z. formosa DSM 19928, Zavarzinella formosa DSM 19928
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.