STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000483485_00674Unannotated protein. (305 aa)    
Predicted Functional Partners:
GCA_000483485_00675
Unannotated protein.
 
 0.997
GCA_000483485_01180
Unannotated protein.
 
 
 0.991
GCA_000483485_00669
Unannotated protein.
  
 
0.985
GCA_000483485_01181
Unannotated protein.
 
 
 0.979
GCA_000483485_01184
Unannotated protein.
   
 0.917
GCA_000483485_00670
Unannotated protein.
    
 0.908
GCA_000483485_00940
Unannotated protein.
 
   
 0.904
GCA_000483485_00141
Unannotated protein.
    
 0.895
GCA_000483485_00139
Unannotated protein.
    
  0.889
GCA_000483485_00673
Unannotated protein.
    
  0.888
Your Current Organism:
Thiomicrorhabdus chilensis
NCBI taxonomy Id: 1123515
Other names: T. chilensis DSM 12352, Thiomicrorhabdus chilensis DSM 12352, Thiomicrospira chilensis DSM 12352
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.