STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000483485_01421Unannotated protein. (456 aa)    
Predicted Functional Partners:
GCA_000483485_01738
Unannotated protein.
 
 
 0.991
GCA_000483485_01170
Unannotated protein.
  
 0.959
GCA_000483485_02165
Unannotated protein.
    
  0.930
GCA_000483485_00906
Unannotated protein.
 
 
 0.857
GCA_000483485_01610
Unannotated protein.
 
 
  
 0.826
GCA_000483485_01962
Unannotated protein.
 
 
 0.786
GCA_000483485_00817
Unannotated protein.
 
 
 0.772
GCA_000483485_01696
Unannotated protein.
 
  
 0.764
GCA_000483485_00697
Unannotated protein.
 
  
 0.733
GCA_000483485_01064
Unannotated protein.
  
  
 0.710
Your Current Organism:
Thiomicrorhabdus chilensis
NCBI taxonomy Id: 1123515
Other names: T. chilensis DSM 12352, Thiomicrorhabdus chilensis DSM 12352, Thiomicrospira chilensis DSM 12352
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.