STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGEO_01925Metallo-beta-lactamase; Bacteria available from KCTC 23882. Source DNA available from KCTC 23882; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)    
Predicted Functional Partners:
MGEO_17730
LuxR family transcriptional regulator; Bacteria available from KCTC 23882. Source DNA available from KCTC 23882; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.730
MGEO_08280
Sulfurtransferase; Bacteria available from KCTC 23882. Source DNA available from KCTC 23882; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.591
MGEO_09085
Tat pathway signal protein; Bacteria available from KCTC 23882. Source DNA available from KCTC 23882; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.553
MGEO_20530
Sulfurtransferase; Bacteria available from KCTC 23882. Source DNA available from KCTC 23882; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.530
MGEO_09445
Hypothetical protein; Bacteria available from KCTC 23882. Source DNA available from KCTC 23882; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.503
MGEO_14815
Monoheme cytochrome C SoxX; Bacteria available from KCTC 23882. Source DNA available from KCTC 23882; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.495
MGEO_10085
Rhodanese; Bacteria available from KCTC 23882. Source DNA available from KCTC 23882; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.452
MGEO_11100
Membrane protein; Bacteria available from KCTC 23882. Source DNA available from KCTC 23882; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.452
MGEO_20370
Hypothetical protein; Bacteria available from KCTC 23882. Source DNA available from KCTC 23882; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.452
MGEO_02875
Nicotinate-nucleotide adenylyltransferase; Bacteria available from KCTC 23882. Source DNA available from KCTC 23882; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.449
Your Current Organism:
Marivita geojedonensis
NCBI taxonomy Id: 1123756
Other names: CCUG 62112, KCTC 23882, M. geojedonensis, Marivita geojedonensis Yoon et al. 2013, Marivita sp. DPG-138, strain DPG-138
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