STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJA04356.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)    
Predicted Functional Partners:
OJA04354.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.
 
 0.999
OJA04355.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OJA06400.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.982
QHL1GM_06285
NADH-quinone oxidoreductase subunit F; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.
 
 0.976
OJA06398.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.
 
 0.972
OJA04353.1
Transcriptional regulator MntR; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.896
OJA06464.1
Metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.886
OJA06640.1
Threonine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.520
OJA06399.1
Zinc ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.504
OJA05682.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
    
  0.442
Your Current Organism:
Halomonas sp. QHL1
NCBI taxonomy Id: 1123773
Other names: H. sp. QHL1
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