STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJA04961.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)    
Predicted Functional Partners:
OJA03956.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.922
OJA04960.1
Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.879
OJA04959.1
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.863
OJA04159.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.853
OJA05175.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.833
OJA04089.1
Toluene tolerance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.821
OJA04088.1
Outer membrane lipid asymmetry maintenance protein MlaD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.808
OJA04962.1
beta-ketoacyl-ACP synthase III; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.807
OJA04963.1
ATP-dependent RNA helicase HrpA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.654
OJA04958.1
Bcr/CflA family drug resistance efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.535
Your Current Organism:
Halomonas sp. QHL1
NCBI taxonomy Id: 1123773
Other names: H. sp. QHL1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.