STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJP71428.1Putative plasmid recombination enzyme type 1. (64 aa)    
Predicted Functional Partners:
EJP71427.1
Hypothetical protein; Identified by glimmer; putative.
       0.773
EJP71429.1
Xaa-Pro aminopeptidase; Identified by match to protein family HMM PF00557; match to protein family HMM PF05195.
       0.556
EJP71430.1
Putative 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Identified by match to protein family HMM PF01494; match to protein family HMM TIGR01988.
       0.556
EJP71431.1
Identified by match to protein family HMM PF01547.
       0.455
EJP71426.1
5-formyltetrahydrofolate cyclo-ligase; Identified by match to protein family HMM PF01812; match to protein family HMM TIGR02727; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
       0.443
EJP71425.1
Hypothetical protein; Identified by glimmer; putative.
       0.408
Your Current Organism:
SAR86 cluster bacterium SAR86A
NCBI taxonomy Id: 1123866
Other names: S. cluster bacterium SAR86A, uncultured SAR86 cluster bacterium SAR86A
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