Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFO14285.1 | SFO57166.1 | SAMN05421854_101776 | SAMN05421854_102346 | Hypothetical protein. | Glycopeptide antibiotics resistance protein. | 0.510 |
SFO57151.1 | SFO57166.1 | SAMN05421854_102345 | SAMN05421854_102346 | Hypothetical protein. | Glycopeptide antibiotics resistance protein. | 0.554 |
SFO57151.1 | SFO57186.1 | SAMN05421854_102345 | SAMN05421854_102347 | Hypothetical protein. | DNA-3-methyladenine glycosylase II. | 0.554 |
SFO57151.1 | SFO57211.1 | SAMN05421854_102345 | SAMN05421854_102348 | Hypothetical protein. | methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | 0.554 |
SFO57151.1 | SFO57231.1 | SAMN05421854_102345 | SAMN05421854_102349 | Hypothetical protein. | Collagen, middle region. | 0.502 |
SFO57166.1 | SFO14285.1 | SAMN05421854_102346 | SAMN05421854_101776 | Glycopeptide antibiotics resistance protein. | Hypothetical protein. | 0.510 |
SFO57166.1 | SFO57151.1 | SAMN05421854_102346 | SAMN05421854_102345 | Glycopeptide antibiotics resistance protein. | Hypothetical protein. | 0.554 |
SFO57166.1 | SFO57186.1 | SAMN05421854_102346 | SAMN05421854_102347 | Glycopeptide antibiotics resistance protein. | DNA-3-methyladenine glycosylase II. | 0.773 |
SFO57166.1 | SFO57211.1 | SAMN05421854_102346 | SAMN05421854_102348 | Glycopeptide antibiotics resistance protein. | methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | 0.773 |
SFO57166.1 | SFO57231.1 | SAMN05421854_102346 | SAMN05421854_102349 | Glycopeptide antibiotics resistance protein. | Collagen, middle region. | 0.693 |
SFO57166.1 | SFO81350.1 | SAMN05421854_102346 | SAMN05421854_10382 | Glycopeptide antibiotics resistance protein. | Hypothetical protein. | 0.460 |
SFO57166.1 | SFQ63873.1 | SAMN05421854_102346 | SAMN05421854_117115 | Glycopeptide antibiotics resistance protein. | D-alanyl-D-alanine carboxypeptidase. | 0.452 |
SFO57166.1 | SFQ75580.1 | SAMN05421854_102346 | SAMN05421854_12320 | Glycopeptide antibiotics resistance protein. | D-alanyl-D-alanine carboxypeptidase. | 0.422 |
SFO57186.1 | SFO57151.1 | SAMN05421854_102347 | SAMN05421854_102345 | DNA-3-methyladenine glycosylase II. | Hypothetical protein. | 0.554 |
SFO57186.1 | SFO57166.1 | SAMN05421854_102347 | SAMN05421854_102346 | DNA-3-methyladenine glycosylase II. | Glycopeptide antibiotics resistance protein. | 0.773 |
SFO57186.1 | SFO57211.1 | SAMN05421854_102347 | SAMN05421854_102348 | DNA-3-methyladenine glycosylase II. | methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | 0.934 |
SFO57186.1 | SFO57231.1 | SAMN05421854_102347 | SAMN05421854_102349 | DNA-3-methyladenine glycosylase II. | Collagen, middle region. | 0.696 |
SFO57211.1 | SFO57151.1 | SAMN05421854_102348 | SAMN05421854_102345 | methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | Hypothetical protein. | 0.554 |
SFO57211.1 | SFO57166.1 | SAMN05421854_102348 | SAMN05421854_102346 | methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | Glycopeptide antibiotics resistance protein. | 0.773 |
SFO57211.1 | SFO57186.1 | SAMN05421854_102348 | SAMN05421854_102347 | methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | DNA-3-methyladenine glycosylase II. | 0.934 |
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