STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP66825.12-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase. (351 aa)    
Predicted Functional Partners:
SFP66792.1
Condensation domain-containing protein.
 
 
 0.703
SFO66939.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
   
  0.686
SFQ61008.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
   
  0.686
cysC
Bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family.
    
 0.618
SFP62512.1
Protein phosphatase.
   
   0.617
SFP85259.1
AAA domain-containing protein.
   
   0.617
SFP87605.1
Predicted kinase.
   
   0.617
SFQ20097.1
Predicted kinase.
   
   0.617
SFQ27860.1
Predicted kinase.
   
   0.617
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 
  0.603
Your Current Organism:
Amycolatopsis rubida
NCBI taxonomy Id: 112413
Other names: A. rubida, Amycolatopsis rubida Huang et al. 2001, Amycolatopsis sp. 13.4, CIP 107102, DSM 44637, JCM 10871, NBRC 100041, NRRL B-24150, strain 13.4
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