Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFN96078.1 | SFP18743.1 | SAMN05421854_101153 | SAMN05421854_104316 | Diguanylate cyclase (GGDEF) domain-containing protein. | Thioredoxin reductase (NADPH). | 0.927 |
SFN96078.1 | SFP41376.1 | SAMN05421854_101153 | SAMN05421854_105196 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.941 |
SFN96078.1 | SFP86025.1 | SAMN05421854_101153 | SAMN05421854_107219 | Diguanylate cyclase (GGDEF) domain-containing protein. | Hypothetical protein. | 0.502 |
SFN96078.1 | SFP90200.1 | SAMN05421854_101153 | SAMN05421854_107395 | Diguanylate cyclase (GGDEF) domain-containing protein. | Histidine kinase-like ATPase domain-containing protein. | 0.992 |
SFN96078.1 | SFQ49129.1 | SAMN05421854_101153 | SAMN05421854_113115 | Diguanylate cyclase (GGDEF) domain-containing protein. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.671 |
SFN96078.1 | SFQ51782.1 | SAMN05421854_101153 | SAMN05421854_1147 | Diguanylate cyclase (GGDEF) domain-containing protein. | FO synthase subunit 1 /FO synthase subunit 2. | 0.790 |
SFN96078.1 | SFQ71325.1 | SAMN05421854_101153 | SAMN05421854_120113 | Diguanylate cyclase (GGDEF) domain-containing protein. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.872 |
SFO03165.1 | SFP86025.1 | SAMN05421854_101367 | SAMN05421854_107219 | Hypothetical protein. | Hypothetical protein. | 0.540 |
SFP18743.1 | SFN96078.1 | SAMN05421854_104316 | SAMN05421854_101153 | Thioredoxin reductase (NADPH). | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.927 |
SFP18743.1 | SFP41376.1 | SAMN05421854_104316 | SAMN05421854_105196 | Thioredoxin reductase (NADPH). | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.927 |
SFP18743.1 | SFP86025.1 | SAMN05421854_104316 | SAMN05421854_107219 | Thioredoxin reductase (NADPH). | Hypothetical protein. | 0.577 |
SFP18743.1 | SFP90200.1 | SAMN05421854_104316 | SAMN05421854_107395 | Thioredoxin reductase (NADPH). | Histidine kinase-like ATPase domain-containing protein. | 0.991 |
SFP18743.1 | SFQ49129.1 | SAMN05421854_104316 | SAMN05421854_113115 | Thioredoxin reductase (NADPH). | Serine phosphatase RsbU, regulator of sigma subunit. | 0.580 |
SFP18743.1 | SFQ51782.1 | SAMN05421854_104316 | SAMN05421854_1147 | Thioredoxin reductase (NADPH). | FO synthase subunit 1 /FO synthase subunit 2. | 0.453 |
SFP18743.1 | SFQ71325.1 | SAMN05421854_104316 | SAMN05421854_120113 | Thioredoxin reductase (NADPH). | Serine phosphatase RsbU, regulator of sigma subunit. | 0.890 |
SFP41376.1 | SFN96078.1 | SAMN05421854_105196 | SAMN05421854_101153 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.941 |
SFP41376.1 | SFP18743.1 | SAMN05421854_105196 | SAMN05421854_104316 | Diguanylate cyclase (GGDEF) domain-containing protein. | Thioredoxin reductase (NADPH). | 0.927 |
SFP41376.1 | SFP86025.1 | SAMN05421854_105196 | SAMN05421854_107219 | Diguanylate cyclase (GGDEF) domain-containing protein. | Hypothetical protein. | 0.502 |
SFP41376.1 | SFP90200.1 | SAMN05421854_105196 | SAMN05421854_107395 | Diguanylate cyclase (GGDEF) domain-containing protein. | Histidine kinase-like ATPase domain-containing protein. | 0.993 |
SFP41376.1 | SFQ49129.1 | SAMN05421854_105196 | SAMN05421854_113115 | Diguanylate cyclase (GGDEF) domain-containing protein. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.671 |
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