Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFP68302.1 | SFQ21170.1 | SAMN05421854_106272 | SAMN05421854_109312 | Hypothetical protein; Belongs to the cytochrome P450 family. | Hypothetical protein. | 0.542 |
SFP87276.1 | SFQ21170.1 | SAMN05421854_107267 | SAMN05421854_109312 | hydroxymethylglutaryl-CoA reductase; Belongs to the HMG-CoA reductase family. | Hypothetical protein. | 0.438 |
SFQ21092.1 | SFQ21112.1 | SAMN05421854_109309 | SAMN05421854_109310 | Predicted arabinose efflux permease, MFS family. | Transcriptional regulator, TetR family. | 0.705 |
SFQ21092.1 | SFQ21137.1 | SAMN05421854_109309 | SAMN05421854_109311 | Predicted arabinose efflux permease, MFS family. | Hypothetical protein. | 0.469 |
SFQ21092.1 | SFQ21170.1 | SAMN05421854_109309 | SAMN05421854_109312 | Predicted arabinose efflux permease, MFS family. | Hypothetical protein. | 0.410 |
SFQ21112.1 | SFQ21092.1 | SAMN05421854_109310 | SAMN05421854_109309 | Transcriptional regulator, TetR family. | Predicted arabinose efflux permease, MFS family. | 0.705 |
SFQ21112.1 | SFQ21137.1 | SAMN05421854_109310 | SAMN05421854_109311 | Transcriptional regulator, TetR family. | Hypothetical protein. | 0.509 |
SFQ21112.1 | SFQ21170.1 | SAMN05421854_109310 | SAMN05421854_109312 | Transcriptional regulator, TetR family. | Hypothetical protein. | 0.443 |
SFQ21112.1 | SFQ21186.1 | SAMN05421854_109310 | SAMN05421854_109313 | Transcriptional regulator, TetR family. | Signal transduction histidine kinase. | 0.427 |
SFQ21137.1 | SFQ21092.1 | SAMN05421854_109311 | SAMN05421854_109309 | Hypothetical protein. | Predicted arabinose efflux permease, MFS family. | 0.469 |
SFQ21137.1 | SFQ21112.1 | SAMN05421854_109311 | SAMN05421854_109310 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.509 |
SFQ21137.1 | SFQ21170.1 | SAMN05421854_109311 | SAMN05421854_109312 | Hypothetical protein. | Hypothetical protein. | 0.661 |
SFQ21137.1 | SFQ21186.1 | SAMN05421854_109311 | SAMN05421854_109313 | Hypothetical protein. | Signal transduction histidine kinase. | 0.501 |
SFQ21137.1 | SFQ21210.1 | SAMN05421854_109311 | SAMN05421854_109314 | Hypothetical protein. | Two component transcriptional regulator, LuxR family. | 0.489 |
SFQ21170.1 | SFP68302.1 | SAMN05421854_109312 | SAMN05421854_106272 | Hypothetical protein. | Hypothetical protein; Belongs to the cytochrome P450 family. | 0.542 |
SFQ21170.1 | SFP87276.1 | SAMN05421854_109312 | SAMN05421854_107267 | Hypothetical protein. | hydroxymethylglutaryl-CoA reductase; Belongs to the HMG-CoA reductase family. | 0.438 |
SFQ21170.1 | SFQ21092.1 | SAMN05421854_109312 | SAMN05421854_109309 | Hypothetical protein. | Predicted arabinose efflux permease, MFS family. | 0.410 |
SFQ21170.1 | SFQ21112.1 | SAMN05421854_109312 | SAMN05421854_109310 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.443 |
SFQ21170.1 | SFQ21137.1 | SAMN05421854_109312 | SAMN05421854_109311 | Hypothetical protein. | Hypothetical protein. | 0.661 |
SFQ21170.1 | SFQ21186.1 | SAMN05421854_109312 | SAMN05421854_109313 | Hypothetical protein. | Signal transduction histidine kinase. | 0.580 |
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