Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFO28809.1 | SFQ49319.1 | SAMN05421854_1011347 | SAMN05421854_113127 | Tat (twin-arginine translocation) pathway signal sequence. | Short-chain dehydrogenase involved in D-alanine esterification of teichoic acids. | 0.492 |
SFO34997.1 | SFO35403.1 | SAMN05421854_1011595 | SAMN05421854_1011612 | SGNH hydrolase-like domain-containing protein, acetyltransferase AlgX. | Alginate O-acetyltransferase complex protein AlgI; Belongs to the membrane-bound acyltransferase family. | 0.759 |
SFO34997.1 | SFQ49319.1 | SAMN05421854_1011595 | SAMN05421854_113127 | SGNH hydrolase-like domain-containing protein, acetyltransferase AlgX. | Short-chain dehydrogenase involved in D-alanine esterification of teichoic acids. | 0.533 |
SFO35403.1 | SFO34997.1 | SAMN05421854_1011612 | SAMN05421854_1011595 | Alginate O-acetyltransferase complex protein AlgI; Belongs to the membrane-bound acyltransferase family. | SGNH hydrolase-like domain-containing protein, acetyltransferase AlgX. | 0.759 |
SFO35403.1 | SFQ49319.1 | SAMN05421854_1011612 | SAMN05421854_113127 | Alginate O-acetyltransferase complex protein AlgI; Belongs to the membrane-bound acyltransferase family. | Short-chain dehydrogenase involved in D-alanine esterification of teichoic acids. | 0.533 |
SFO52668.1 | SFQ49319.1 | SAMN05421854_102126 | SAMN05421854_113127 | Uncharacterized conserved protein PhnB, glyoxalase superfamily. | Short-chain dehydrogenase involved in D-alanine esterification of teichoic acids. | 0.466 |
SFO52710.1 | SFQ49319.1 | SAMN05421854_102128 | SAMN05421854_113127 | DNA-binding transcriptional regulator, MarR family. | Short-chain dehydrogenase involved in D-alanine esterification of teichoic acids. | 0.645 |
SFQ49319.1 | SFO28809.1 | SAMN05421854_113127 | SAMN05421854_1011347 | Short-chain dehydrogenase involved in D-alanine esterification of teichoic acids. | Tat (twin-arginine translocation) pathway signal sequence. | 0.492 |
SFQ49319.1 | SFO34997.1 | SAMN05421854_113127 | SAMN05421854_1011595 | Short-chain dehydrogenase involved in D-alanine esterification of teichoic acids. | SGNH hydrolase-like domain-containing protein, acetyltransferase AlgX. | 0.533 |
SFQ49319.1 | SFO35403.1 | SAMN05421854_113127 | SAMN05421854_1011612 | Short-chain dehydrogenase involved in D-alanine esterification of teichoic acids. | Alginate O-acetyltransferase complex protein AlgI; Belongs to the membrane-bound acyltransferase family. | 0.533 |
SFQ49319.1 | SFO52668.1 | SAMN05421854_113127 | SAMN05421854_102126 | Short-chain dehydrogenase involved in D-alanine esterification of teichoic acids. | Uncharacterized conserved protein PhnB, glyoxalase superfamily. | 0.466 |
SFQ49319.1 | SFO52710.1 | SAMN05421854_113127 | SAMN05421854_102128 | Short-chain dehydrogenase involved in D-alanine esterification of teichoic acids. | DNA-binding transcriptional regulator, MarR family. | 0.645 |
SFQ49319.1 | SFQ49335.1 | SAMN05421854_113127 | SAMN05421854_113128 | Short-chain dehydrogenase involved in D-alanine esterification of teichoic acids. | Helix-turn-helix domain-containing protein. | 0.774 |
SFQ49335.1 | SFQ49319.1 | SAMN05421854_113128 | SAMN05421854_113127 | Helix-turn-helix domain-containing protein. | Short-chain dehydrogenase involved in D-alanine esterification of teichoic acids. | 0.774 |