Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFQ19976.1 | SFQ51795.1 | SAMN05421854_109268 | SAMN05421854_1148 | Hypothetical protein. | PucR C-terminal helix-turn-helix domain-containing protein. | 0.486 |
SFQ36400.1 | SFQ51795.1 | SAMN05421854_11182 | SAMN05421854_1148 | Transcriptional regulatory protein, C terminal. | PucR C-terminal helix-turn-helix domain-containing protein. | 0.549 |
SFQ37726.1 | SFQ51795.1 | SAMN05421854_111139 | SAMN05421854_1148 | Cytochrome P450. | PucR C-terminal helix-turn-helix domain-containing protein. | 0.506 |
SFQ51795.1 | SFQ19976.1 | SAMN05421854_1148 | SAMN05421854_109268 | PucR C-terminal helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.486 |
SFQ51795.1 | SFQ36400.1 | SAMN05421854_1148 | SAMN05421854_11182 | PucR C-terminal helix-turn-helix domain-containing protein. | Transcriptional regulatory protein, C terminal. | 0.549 |
SFQ51795.1 | SFQ37726.1 | SAMN05421854_1148 | SAMN05421854_111139 | PucR C-terminal helix-turn-helix domain-containing protein. | Cytochrome P450. | 0.506 |
SFQ51795.1 | SFQ51812.1 | SAMN05421854_1148 | SAMN05421854_1149 | PucR C-terminal helix-turn-helix domain-containing protein. | Acetyl esterase/lipase. | 0.791 |
SFQ51795.1 | SFQ51828.1 | SAMN05421854_1148 | SAMN05421854_11410 | PucR C-terminal helix-turn-helix domain-containing protein. | 2-polyprenyl-6-methoxyphenol hydroxylase. | 0.487 |
SFQ51795.1 | SFQ75669.1 | SAMN05421854_1148 | SAMN05421854_12328 | PucR C-terminal helix-turn-helix domain-containing protein. | Protein of unknown function DUF87. | 0.482 |
SFQ51795.1 | ureD | SAMN05421854_1148 | SAMN05421854_10923 | PucR C-terminal helix-turn-helix domain-containing protein. | Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.403 |
SFQ51812.1 | SFQ51795.1 | SAMN05421854_1149 | SAMN05421854_1148 | Acetyl esterase/lipase. | PucR C-terminal helix-turn-helix domain-containing protein. | 0.791 |
SFQ51812.1 | SFQ51828.1 | SAMN05421854_1149 | SAMN05421854_11410 | Acetyl esterase/lipase. | 2-polyprenyl-6-methoxyphenol hydroxylase. | 0.589 |
SFQ51828.1 | SFQ51795.1 | SAMN05421854_11410 | SAMN05421854_1148 | 2-polyprenyl-6-methoxyphenol hydroxylase. | PucR C-terminal helix-turn-helix domain-containing protein. | 0.487 |
SFQ51828.1 | SFQ51812.1 | SAMN05421854_11410 | SAMN05421854_1149 | 2-polyprenyl-6-methoxyphenol hydroxylase. | Acetyl esterase/lipase. | 0.589 |
SFQ75669.1 | SFQ51795.1 | SAMN05421854_12328 | SAMN05421854_1148 | Protein of unknown function DUF87. | PucR C-terminal helix-turn-helix domain-containing protein. | 0.482 |
ureD | SFQ51795.1 | SAMN05421854_10923 | SAMN05421854_1148 | Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | PucR C-terminal helix-turn-helix domain-containing protein. | 0.403 |