Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFN97880.1 | SFO10527.1 | SAMN05421854_101206 | SAMN05421854_101630 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Hypothetical protein. | 0.457 |
SFN97880.1 | SFQ43613.1 | SAMN05421854_101206 | SAMN05421854_11293 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Glutamate synthase (NADPH/NADH) large chain. | 0.981 |
SFN97880.1 | SFQ52851.1 | SAMN05421854_101206 | SAMN05421854_11488 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Glutamate synthase (NADPH/NADH) large chain. | 0.981 |
SFN97880.1 | SFQ63649.1 | SAMN05421854_101206 | SAMN05421854_117100 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | DNA binding domain-containing protein, excisionase family. | 0.787 |
SFN97880.1 | SFQ64629.1 | SAMN05421854_101206 | SAMN05421854_117170 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Acetyl/propionyl-CoA carboxylase, alpha subunit. | 0.941 |
SFO10188.1 | SFO10527.1 | SAMN05421854_101622 | SAMN05421854_101630 | DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. | Hypothetical protein. | 0.830 |
SFO10188.1 | SFQ63627.1 | SAMN05421854_101622 | SAMN05421854_11799 | DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. | Hypothetical protein. | 0.789 |
SFO10188.1 | SFQ63649.1 | SAMN05421854_101622 | SAMN05421854_117100 | DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. | DNA binding domain-containing protein, excisionase family. | 0.659 |
SFO10188.1 | SFQ63664.1 | SAMN05421854_101622 | SAMN05421854_117101 | DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.632 |
SFO10527.1 | SFN97880.1 | SAMN05421854_101630 | SAMN05421854_101206 | Hypothetical protein. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.457 |
SFO10527.1 | SFO10188.1 | SAMN05421854_101630 | SAMN05421854_101622 | Hypothetical protein. | DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. | 0.830 |
SFO10527.1 | SFQ63601.1 | SAMN05421854_101630 | SAMN05421854_11797 | Hypothetical protein. | DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. | 0.643 |
SFO10527.1 | SFQ63649.1 | SAMN05421854_101630 | SAMN05421854_117100 | Hypothetical protein. | DNA binding domain-containing protein, excisionase family. | 0.573 |
SFQ43613.1 | SFN97880.1 | SAMN05421854_11293 | SAMN05421854_101206 | Glutamate synthase (NADPH/NADH) large chain. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.981 |
SFQ43613.1 | SFQ52851.1 | SAMN05421854_11293 | SAMN05421854_11488 | Glutamate synthase (NADPH/NADH) large chain. | Glutamate synthase (NADPH/NADH) large chain. | 0.999 |
SFQ43613.1 | SFQ63649.1 | SAMN05421854_11293 | SAMN05421854_117100 | Glutamate synthase (NADPH/NADH) large chain. | DNA binding domain-containing protein, excisionase family. | 0.788 |
SFQ43613.1 | SFQ64629.1 | SAMN05421854_11293 | SAMN05421854_117170 | Glutamate synthase (NADPH/NADH) large chain. | Acetyl/propionyl-CoA carboxylase, alpha subunit. | 0.784 |
SFQ52851.1 | SFN97880.1 | SAMN05421854_11488 | SAMN05421854_101206 | Glutamate synthase (NADPH/NADH) large chain. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.981 |
SFQ52851.1 | SFQ43613.1 | SAMN05421854_11488 | SAMN05421854_11293 | Glutamate synthase (NADPH/NADH) large chain. | Glutamate synthase (NADPH/NADH) large chain. | 0.999 |
SFQ52851.1 | SFQ63649.1 | SAMN05421854_11488 | SAMN05421854_117100 | Glutamate synthase (NADPH/NADH) large chain. | DNA binding domain-containing protein, excisionase family. | 0.788 |
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