STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
maiA-2Maleate isomerase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate. (252 aa)    
Predicted Functional Partners:
SFQ71486.1
2,5-dihydroxypyridine 5,6-dioxygenase.
 
  
 0.952
SFQ71470.1
N-formylmaleamate deformylase.
 
  
 0.923
SFQ02250.1
Maleate isomerase.
  
  
  0.894
SFO65142.1
Maleate cis-trans isomerase.
  
  
  0.866
SFQ71478.1
N-formylmaleamate deformylase.
 
     0.866
SFO65124.1
Maleate isomerase.
  
  
 
0.789
SFQ38775.1
Succinate dehydrogenase subunit A.
   
 
  0.782
SFQ42939.1
Succinate dehydrogenase / fumarate reductase flavoprotein subunit.
   
 
  0.782
SFO22672.1
Aspartate aminotransferase/aminotransferase.
  
  
  0.752
SFQ02791.1
Nicotinamidase-related amidase.
 
  
 0.740
Your Current Organism:
Amycolatopsis rubida
NCBI taxonomy Id: 112413
Other names: A. rubida, Amycolatopsis rubida Huang et al. 2001, Amycolatopsis sp. 13.4, CIP 107102, DSM 44637, JCM 10871, NBRC 100041, NRRL B-24150, strain 13.4
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