STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000346615_00198Unannotated protein. (336 aa)    
Predicted Functional Partners:
GCA_000346615_00197
Unannotated protein.
 
    0.943
GCA_000346615_00195
Unannotated protein.
 
  
 0.870
GCA_000346615_00194
Unannotated protein.
 
     0.812
GCA_000346615_00196
Unannotated protein.
 
 
  0.808
GCA_000346615_00193
Unannotated protein.
       0.773
GCA_000346615_00199
Unannotated protein.
 
     0.691
GCA_000346615_00190
Unannotated protein.
       0.671
GCA_000346615_00191
Unannotated protein.
       0.671
GCA_000346615_00192
Unannotated protein.
       0.671
GCA_000346615_02011
Unannotated protein.
  
    0.668
Your Current Organism:
Nafulsella turpanensis
NCBI taxonomy Id: 1124780
Other names: Cytophagales bacterium ZLM-10, N. turpanensis ZLM-10, Nafulsella turpanensis ZLM-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.