STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000346615_02204Unannotated protein. (492 aa)    
Predicted Functional Partners:
GCA_000346615_00609
Unannotated protein.
  
 0.998
GCA_000346615_01974
Unannotated protein.
  
 0.991
GCA_000346615_03074
Unannotated protein.
 
 0.989
GCA_000346615_03440
Unannotated protein.
  
 0.986
GCA_000346615_01421
Unannotated protein.
  
 0.979
GCA_000346615_00227
Unannotated protein.
  
 0.973
GCA_000346615_01393
Unannotated protein.
  
 0.972
GCA_000346615_03658
Unannotated protein.
  
 0.972
GCA_000346615_02971
Unannotated protein.
   
 0.830
GCA_000346615_00317
Unannotated protein.
  
    0.774
Your Current Organism:
Nafulsella turpanensis
NCBI taxonomy Id: 1124780
Other names: Cytophagales bacterium ZLM-10, N. turpanensis ZLM-10, Nafulsella turpanensis ZLM-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.