STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000346615_04139Unannotated protein. (456 aa)    
Predicted Functional Partners:
GCA_000346615_04137
Unannotated protein.
       0.773
GCA_000346615_04138
Unannotated protein.
       0.773
GCA_000346615_01354
Unannotated protein.
  
    0.754
GCA_000346615_04096
Unannotated protein.
  
     0.723
GCA_000346615_01358
Unannotated protein.
  
     0.713
GCA_000346615_03789
Unannotated protein.
  
     0.707
GCA_000346615_03790
Unannotated protein.
  
     0.703
GCA_000346615_04136
Unannotated protein.
       0.645
GCA_000346615_01353
Unannotated protein.
  
     0.613
GCA_000346615_03702
Unannotated protein.
 
    0.598
Your Current Organism:
Nafulsella turpanensis
NCBI taxonomy Id: 1124780
Other names: Cytophagales bacterium ZLM-10, N. turpanensis ZLM-10, Nafulsella turpanensis ZLM-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.