STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RCC_12109Related to Ctr copper transporter. (180 aa)    
Predicted Functional Partners:
RCC_01552
Related to copper transport protein.
    
 
 0.836
RCC_05286
Related to a putative low-affinity copper transport protein.
    
 
 0.654
RCC_09383
PUM-HD domain-containing protein.
    
   0.619
RCC_04094
Related to cysteine-rich protein NFX-1.
   
    0.602
RCC_09029
Related to mouse proteinase activated receptor 2.
    
   0.569
RCC_02973
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
      
 0.505
RCC_02646
Related to ferric-chelate reductase.
    
 
 0.468
RCC_04814
Related to metalloreductase.
    
 
 0.468
RCC_12116
Related to P-type ATPase.
    
 
 0.449
RCC_03193
Probable copper-transporting ATPase 1.
    
 
 0.449
Your Current Organism:
Ramularia collocygni
NCBI taxonomy Id: 112498
Other names: CBS 101180, Ophiocladium hordei, Ovularia hordei, R. collo-cygni, Ramularia collo-cygni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.