STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCC_03051Related to cytochrome P450 family protein. (451 aa)    
Predicted Functional Partners:
RCC_05599
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.791
RCC_02619
Lysophospholipase.
    
  0.618
RCC_02392
Related to steroid alpha reductase family protein.
    
  0.580
RCC_02350
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
  
  0.575
RCC_08521
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
 
  0.563
RCC_00069
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.561
RCC_04148
3'-5' exonuclease domain-containing protein.
    
  0.548
RCC_07210
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
    
 0.540
RCC_08466
Related to cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies; Belongs to the cytochrome P450 family.
  
 
  0.516
RCC_10123
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
  
  0.509
Your Current Organism:
Ramularia collocygni
NCBI taxonomy Id: 112498
Other names: CBS 101180, Ophiocladium hordei, Ovularia hordei, R. collo-cygni, Ramularia collo-cygni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.