STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCC_05658Related to NADPH2 dehydrogenase chain OYE2. (342 aa)    
Predicted Functional Partners:
RCC_04945
annotation not available
     
 0.474
RCC_00994
Probable electron transfer flavoprotein beta chain.
  
 
 0.451
RCC_00016
Related to haloacid dehalogenase, type II.
  
 
  0.421
RCC_00362
Probable acyl-coenzyme A synthetases/AMP-(Fatty) acid ligases.
  
 
  0.421
RCC_00031
Related to Acyl-coenzyme A synthetase ACSM5, mitochondrial.
  
 
  0.421
RCC_02846
Related to acetoacetyl-CoA synthase.
  
 
  0.421
RCC_10000
Related to acyl-CoA synthetase.
  
 
  0.421
RCC_07147
Probable acyl-CoA synthetase.
  
 
  0.421
RCC_08608
Acetyl-coenzyme A synthetase.
  
 
  0.421
RCC_05665
NADPH:adrenodoxin oxidoreductase, mitochondrial.
    
  0.416
Your Current Organism:
Ramularia collocygni
NCBI taxonomy Id: 112498
Other names: CBS 101180, Ophiocladium hordei, Ovularia hordei, R. collo-cygni, Ramularia collo-cygni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.