STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCC_04565Uncharacterized protein. (379 aa)    
Predicted Functional Partners:
RCC_06915
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
  0.497
RCC_04564
Uncharacterized protein.
 
  
   0.471
RCC_06670
Related to NRC-1 MAPKK kinase.
    
 0.458
RCC_04504
Protein kinase domain-containing protein.
    
 0.458
RCC_09375
Related to MID1 protein.
  
 
  0.432
RCC_04187
Peptidylprolyl isomerase.
    
 0.421
RCC_01087
Uncharacterized protein.
    
  0.411
RCC_07958
Related to 26S proteasome regulatory subunit RPN11.
    
  0.409
RCC_07291
Uncharacterized protein.
    
  0.404
Your Current Organism:
Ramularia collocygni
NCBI taxonomy Id: 112498
Other names: CBS 101180, Ophiocladium hordei, Ovularia hordei, R. collo-cygni, Ramularia collo-cygni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.