RCC_04645 protein (Ramularia collocygni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Cooccurrence

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Experiments

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[Homology]

Score

RCC_04645

Uncharacterized protein. (274 aa)

Predicted Functional Partners:

RCC_05599

0.777

RCC_02718

0.537

RCC_07291

0.536

RCC_04752

0.536

RCC_06037

0.536

RCC_11188

0.536

RCC_04829

0.536

RCC_04002

0.535

RCC_06982

0.535

RCC_00406

0.535

Your Current Organism:

Ramularia collocygni

NCBI taxonomy Id: 112498
Other names: CBS 101180, Ophiocladium hordei, Ovularia hordei, R. collo-cygni, Ramularia collo-cygni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RCC_00406	RCC_02718	A0A2D3UZ01	A0A2D3V915	Mitochondrial/chloroplast ribosomal protein S14/S29.	Uncharacterized protein.	0.999
RCC_00406	RCC_04002	A0A2D3UZ01	A0A2D3UP50	Mitochondrial/chloroplast ribosomal protein S14/S29.	Related to ribosomal protein.	0.997
RCC_00406	RCC_04645	A0A2D3UZ01	A0A2D3URT4	Mitochondrial/chloroplast ribosomal protein S14/S29.	Uncharacterized protein.	0.535
RCC_00406	RCC_04752	A0A2D3UZ01	A0A2D3V2K2	Mitochondrial/chloroplast ribosomal protein S14/S29.	Probable 37S ribosomal protein Mrp17.	0.999
RCC_00406	RCC_04829	A0A2D3UZ01	A0A2D3V8R4	Mitochondrial/chloroplast ribosomal protein S14/S29.	Related to 40S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.	0.999
RCC_00406	RCC_06037	A0A2D3UZ01	A0A2D3V403	Mitochondrial/chloroplast ribosomal protein S14/S29.	Related to MRP4-mitochondrial ribosomal protein, small subunit.	0.999
RCC_00406	RCC_06982	A0A2D3UZ01	A0A2D3UWH0	Mitochondrial/chloroplast ribosomal protein S14/S29.	Related to ribosomal protein S15.	0.999
RCC_00406	RCC_11188	A0A2D3UZ01	A0A2D3V7P8	Mitochondrial/chloroplast ribosomal protein S14/S29.	Related to 37S ribosomal protein S16.	0.999
RCC_02718	RCC_00406	A0A2D3V915	A0A2D3UZ01	Uncharacterized protein.	Mitochondrial/chloroplast ribosomal protein S14/S29.	0.999
RCC_02718	RCC_04002	A0A2D3V915	A0A2D3UP50	Uncharacterized protein.	Related to ribosomal protein.	0.998
RCC_02718	RCC_04645	A0A2D3V915	A0A2D3URT4	Uncharacterized protein.	Uncharacterized protein.	0.537
RCC_02718	RCC_04752	A0A2D3V915	A0A2D3V2K2	Uncharacterized protein.	Probable 37S ribosomal protein Mrp17.	0.999
RCC_02718	RCC_04829	A0A2D3V915	A0A2D3V8R4	Uncharacterized protein.	Related to 40S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.	0.999
RCC_02718	RCC_06037	A0A2D3V915	A0A2D3V403	Uncharacterized protein.	Related to MRP4-mitochondrial ribosomal protein, small subunit.	0.999
RCC_02718	RCC_06982	A0A2D3V915	A0A2D3UWH0	Uncharacterized protein.	Related to ribosomal protein S15.	0.999
RCC_02718	RCC_11188	A0A2D3V915	A0A2D3V7P8	Uncharacterized protein.	Related to 37S ribosomal protein S16.	0.999
RCC_04002	RCC_00406	A0A2D3UP50	A0A2D3UZ01	Related to ribosomal protein.	Mitochondrial/chloroplast ribosomal protein S14/S29.	0.997
RCC_04002	RCC_02718	A0A2D3UP50	A0A2D3V915	Related to ribosomal protein.	Uncharacterized protein.	0.998
RCC_04002	RCC_04645	A0A2D3UP50	A0A2D3URT4	Related to ribosomal protein.	Uncharacterized protein.	0.535
RCC_04002	RCC_04752	A0A2D3UP50	A0A2D3V2K2	Related to ribosomal protein.	Probable 37S ribosomal protein Mrp17.	0.997