STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCC_01459Probable NAD binding Rossmann fold oxidoreductase. (415 aa)    
Predicted Functional Partners:
RCC_05469
Probable L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily.
     
 0.865
RCC_10741
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.840
RCC_02969
MAGE domain-containing protein.
   
 
  0.772
RCC_02826
Related to gluconolactonase.
  
 
 0.640
RCC_02162
Related to galactokinase.
  
 0.551
RCC_03044
Nicotinamide-nucleotide adenylyltransferase; Belongs to the eukaryotic NMN adenylyltransferase family.
     
 0.511
RCC_05103
NAD(P)-bd_dom domain-containing protein.
  
 
 0.505
RCC_10692
Related to UDPglucose 4-epimerase.
  
 
 0.505
RCC_05105
RmlD_sub_bind domain-containing protein.
  
 
 0.505
RCC_00694
Probable aspartate-semialdehyde dehydrogenase.
   
 
  0.497
Your Current Organism:
Ramularia collocygni
NCBI taxonomy Id: 112498
Other names: CBS 101180, Ophiocladium hordei, Ovularia hordei, R. collo-cygni, Ramularia collo-cygni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.