STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCC_08173Uncharacterized protein. (186 aa)    
Predicted Functional Partners:
RCC_07243
Related to Histone acetyltransferase type B subunit 2.
    
 
 0.702
RCC_10722
Sister chromatid cohesion protein.
   
    0.583
RCC_05878
Related to histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.
   
   0.541
RCC_07827
Uncharacterized protein.
   
   0.540
RCC_05544
Related to SNF2 family helicase/ATPase PasG.
    
 
 0.504
RCC_06692
Probable SNF2 family helicase/ATPase.
    
 
 0.504
RCC_10051
Uncharacterized protein.
    
 
 0.504
RCC_11106
Uncharacterized protein.
   
    0.418
RCC_10980
PHD domain-containing protein.
   
    0.418
Your Current Organism:
Ramularia collocygni
NCBI taxonomy Id: 112498
Other names: CBS 101180, Ophiocladium hordei, Ovularia hordei, R. collo-cygni, Ramularia collo-cygni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.