STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A287FWR1Uncharacterized protein. (904 aa)    
Predicted Functional Partners:
A0A287HX60
Autophagy-related protein.
    
  0.792
A0A287J8N3
Autophagy-related protein.
    
  0.792
A0A287R4Z8
Autophagy-related protein.
    
  0.792
A0A287UUZ0
Peptidase C50 domain-containing protein.
    
 0.762
F2DPQ8_HORVV
Predicted protein.
    
 
 0.691
A0A287L1V7
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.684
A0A287TZY4
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.684
F2CVE0_HORVV
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.684
F2DAJ1_HORVV
Predicted protein.
   
  0.670
A0A287IPV1
Malate synthase; Belongs to the malate synthase family.
   
 
 0.629
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 112509
Other names: H. vulgare subsp. vulgare, Hordeum sativum, Hordeum sativum Jess., Hordeum vulgare subsp. vulgare, Hordeum vulgare var. nudum, Hordeum vulgare var. nudum Spenn., Hordeum vulgare var. vulgare, domesticated barley, two-rowed barley
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.