STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A287HW43Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family. (181 aa)    
Predicted Functional Partners:
A0A287QWQ7
Uncharacterized protein.
   
 0.997
A0A287U1D7
Uncharacterized protein.
   
 0.997
A0A287UL55
Uncharacterized protein.
   
 0.997
A0A287VW81
Uncharacterized protein.
   
 0.997
F2DVU2_HORVV
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.997
F2EAU8_HORVV
Predicted protein.
   
 0.997
M0VZ55_HORVV
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.997
M0XWV5_HORVV
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.997
A0A287I0Z1
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.996
A0A287IB06
Uncharacterized protein.
   
 0.996
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 112509
Other names: H. vulgare subsp. vulgare, Hordeum sativum, Hordeum sativum Jess., Hordeum vulgare subsp. vulgare, Hordeum vulgare var. nudum, Hordeum vulgare var. nudum Spenn., Hordeum vulgare var. vulgare, domesticated barley, two-rowed barley
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.