STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A287JWB4BTB domain-containing protein. (484 aa)    
Predicted Functional Partners:
A0A287EU86
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.821
A0A287EUB9
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.821
A0A287JJ82
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.821
A0A287K1B1
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.821
A0A287MGJ3
Cullin domain-containing protein; Belongs to the cullin family.
   
 0.821
A0A287UQM5
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.821
A0A287FK03
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.683
A0A287IZN4
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
   0.683
A0A287PXV7
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.683
A0A287JVE5
RING-type domain-containing protein.
    
 0.657
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 112509
Other names: H. vulgare subsp. vulgare, Hordeum sativum, Hordeum sativum Jess., Hordeum vulgare subsp. vulgare, Hordeum vulgare var. nudum, Hordeum vulgare var. nudum Spenn., Hordeum vulgare var. vulgare, domesticated barley, two-rowed barley
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.