STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A287MFU7Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (845 aa)    
Predicted Functional Partners:
M0YIR5_HORVV
TF-B3 domain-containing protein.
  
   
 0.518
A0A287S5P7
NAC domain-containing protein.
  
     0.517
A0A287Y155
Terpene_synth_C domain-containing protein.
  
     0.509
A0A287QV64
TCP domain-containing protein.
  
     0.483
F2E0E4_HORVV
Predicted protein.
  
     0.482
A0A287HF90
Uncharacterized protein.
  
     0.476
A0A287LTU7
Uncharacterized protein.
  
     0.476
A0A287S5L5
NAC domain-containing protein.
  
     0.476
M0ULC5_HORVV
Uncharacterized protein.
  
     0.475
A0A287XLB5
BHLH domain-containing protein.
  
     0.474
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 112509
Other names: H. vulgare subsp. vulgare, Hordeum sativum, Hordeum sativum Jess., Hordeum vulgare subsp. vulgare, Hordeum vulgare var. nudum, Hordeum vulgare var. nudum Spenn., Hordeum vulgare var. vulgare, domesticated barley, two-rowed barley
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