STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A287NBJ4S4 RNA-binding domain-containing protein. (385 aa)    
Predicted Functional Partners:
A0A287FQS5
Uncharacterized protein.
  
  
 0.859
A0A287MN72
Uncharacterized protein.
  
  
 0.859
A0A287NEH3
Uncharacterized protein.
  
  
 0.859
A0A287RER7
Uncharacterized protein.
  
  
 0.859
A0A287E1C7
RNA_pol_Rpb1_5 domain-containing protein.
   
  
 0.794
A0A287EYL4
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  
 0.794
A0A287F891
RNA_pol_Rpb1_1 domain-containing protein.
   
  
 0.794
A0A287K4V0
RNA_pol_Rpb1_1 domain-containing protein.
   
  
 0.794
A0A287PY68
RNA_pol_Rpb1_2 domain-containing protein.
   
  
 0.794
A0A287S0X6
RPOLA_N domain-containing protein.
   
  
 0.794
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 112509
Other names: H. vulgare subsp. vulgare, Hordeum sativum, Hordeum sativum Jess., Hordeum vulgare subsp. vulgare, Hordeum vulgare var. nudum, Hordeum vulgare var. nudum Spenn., Hordeum vulgare var. vulgare, domesticated barley, two-rowed barley
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