Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A287E1C7 | A0A287EYL4 | RNA_pol_Rpb1_5 domain-containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.940 |
A0A287E1C7 | A0A287F891 | RNA_pol_Rpb1_5 domain-containing protein. | RNA_pol_Rpb1_1 domain-containing protein. | 0.940 |
A0A287E1C7 | A0A287K4V0 | RNA_pol_Rpb1_5 domain-containing protein. | RNA_pol_Rpb1_1 domain-containing protein. | 0.940 |
A0A287E1C7 | A0A287NBJ4 | RNA_pol_Rpb1_5 domain-containing protein. | S4 RNA-binding domain-containing protein. | 0.794 |
A0A287E1C7 | A0A287PY68 | RNA_pol_Rpb1_5 domain-containing protein. | RNA_pol_Rpb1_2 domain-containing protein. | 0.940 |
A0A287E1C7 | A0A287S0X6 | RNA_pol_Rpb1_5 domain-containing protein. | RPOLA_N domain-containing protein. | 0.952 |
A0A287EYL4 | A0A287E1C7 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA_pol_Rpb1_5 domain-containing protein. | 0.940 |
A0A287EYL4 | A0A287NBJ4 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | S4 RNA-binding domain-containing protein. | 0.794 |
A0A287F891 | A0A287E1C7 | RNA_pol_Rpb1_1 domain-containing protein. | RNA_pol_Rpb1_5 domain-containing protein. | 0.940 |
A0A287F891 | A0A287NBJ4 | RNA_pol_Rpb1_1 domain-containing protein. | S4 RNA-binding domain-containing protein. | 0.794 |
A0A287F891 | A0A287S0X6 | RNA_pol_Rpb1_1 domain-containing protein. | RPOLA_N domain-containing protein. | 0.433 |
A0A287FQS5 | A0A287MN72 | Uncharacterized protein. | Uncharacterized protein. | 0.881 |
A0A287FQS5 | A0A287NBJ4 | Uncharacterized protein. | S4 RNA-binding domain-containing protein. | 0.859 |
A0A287FQS5 | A0A287NEH3 | Uncharacterized protein. | Uncharacterized protein. | 0.892 |
A0A287K4V0 | A0A287E1C7 | RNA_pol_Rpb1_1 domain-containing protein. | RNA_pol_Rpb1_5 domain-containing protein. | 0.940 |
A0A287K4V0 | A0A287NBJ4 | RNA_pol_Rpb1_1 domain-containing protein. | S4 RNA-binding domain-containing protein. | 0.794 |
A0A287K4V0 | A0A287S0X6 | RNA_pol_Rpb1_1 domain-containing protein. | RPOLA_N domain-containing protein. | 0.441 |
A0A287MN72 | A0A287FQS5 | Uncharacterized protein. | Uncharacterized protein. | 0.881 |
A0A287MN72 | A0A287NBJ4 | Uncharacterized protein. | S4 RNA-binding domain-containing protein. | 0.859 |
A0A287MN72 | A0A287NEH3 | Uncharacterized protein. | Uncharacterized protein. | 0.948 |
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