Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A287IIK1 | A0A287K4B6 | A0A287IIK1 | A0A287K4B6 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | DUF569 domain-containing protein. | 0.566 |
A0A287IIK1 | A0A287QBQ1 | A0A287IIK1 | A0A287QBQ1 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein. | 0.400 |
A0A287IIK1 | A0A287QE58 | A0A287IIK1 | A0A287QE58 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein. | 0.422 |
A0A287IIK1 | A0A287S1S1 | A0A287IIK1 | A0A287S1S1 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein. | 0.499 |
A0A287IIK1 | A0A287SK68 | A0A287IIK1 | A0A287SK68 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | AAI domain-containing protein. | 0.466 |
A0A287IIK1 | A0A287WAC3 | A0A287IIK1 | A0A287WAC3 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein. | 0.589 |
A0A287IIK1 | F2CUL7_HORVV | A0A287IIK1 | F2CUL7 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Predicted protein. | 0.417 |
A0A287IIK1 | M0UIC3_HORVV | A0A287IIK1 | M0UIC3 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | DUF632 domain-containing protein. | 0.552 |
A0A287K4B6 | A0A287IIK1 | A0A287K4B6 | A0A287IIK1 | DUF569 domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.566 |
A0A287K4B6 | A0A287KNQ1 | A0A287K4B6 | A0A287KNQ1 | DUF569 domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.498 |
A0A287K4B6 | A0A287QBQ1 | A0A287K4B6 | A0A287QBQ1 | DUF569 domain-containing protein. | Uncharacterized protein. | 0.509 |
A0A287K4B6 | A0A287QE58 | A0A287K4B6 | A0A287QE58 | DUF569 domain-containing protein. | Uncharacterized protein. | 0.406 |
A0A287K4B6 | A0A287S1S1 | A0A287K4B6 | A0A287S1S1 | DUF569 domain-containing protein. | Uncharacterized protein. | 0.503 |
A0A287K4B6 | A0A287SK68 | A0A287K4B6 | A0A287SK68 | DUF569 domain-containing protein. | AAI domain-containing protein. | 0.536 |
A0A287K4B6 | A0A287WAC3 | A0A287K4B6 | A0A287WAC3 | DUF569 domain-containing protein. | Uncharacterized protein. | 0.559 |
A0A287K4B6 | F2CQ16_HORVV | A0A287K4B6 | F2CQ16 | DUF569 domain-containing protein. | Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. | 0.483 |
A0A287K4B6 | F2CUL7_HORVV | A0A287K4B6 | F2CUL7 | DUF569 domain-containing protein. | Predicted protein. | 0.596 |
A0A287K4B6 | M0UIC3_HORVV | A0A287K4B6 | M0UIC3 | DUF569 domain-containing protein. | DUF632 domain-containing protein. | 0.552 |
A0A287KNQ1 | A0A287K4B6 | A0A287KNQ1 | A0A287K4B6 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | DUF569 domain-containing protein. | 0.498 |
A0A287KNQ1 | A0A287S1S1 | A0A287KNQ1 | A0A287S1S1 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein. | 0.497 |
page 1 of 5