STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A287WFP7NAC domain-containing protein. (453 aa)    
Predicted Functional Partners:
M0ZFS5_HORVV
WD_REPEATS_REGION domain-containing protein.
   
 0.871
A0A287LB51
EGF_CA domain-containing protein.
    
 0.841
A0A287IMF4
Ipi1_N domain-containing protein.
    
 0.839
F2DHF8_HORVV
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.708
A0A287H5Y6
Uncharacterized protein.
   
 0.687
A0A287EA93
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.673
M0WVE5_HORVV
CBF domain-containing protein.
   
   0.643
A0A287HN17
WD_REPEATS_REGION domain-containing protein.
   
 0.627
A0A287HN34
NLE domain-containing protein.
   
 0.627
F2EJJ3_HORVV
Predicted protein.
    
  0.614
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 112509
Other names: H. vulgare subsp. vulgare, Hordeum sativum, Hordeum sativum Jess., Hordeum vulgare subsp. vulgare, Hordeum vulgare var. nudum, Hordeum vulgare var. nudum Spenn., Hordeum vulgare var. vulgare, domesticated barley, two-rowed barley
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.