A0A287XT79 protein (Hordeum vulgare) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A287XT79

Uncharacterized protein. (433 aa)

Predicted Functional Partners:

A0A287FUE1

0.976

A0A287SMI4

0.972

F2EBI3_HORVV

0.967

A0A287TPD6

0.962

A0A287MRH6

0.961

A0A287MX54

0.961

F2EEW2_HORVV

0.944

F2E7J2_HORVV

0.906

A0A287GQZ2

0.895

F2E000_HORVV

0.895

Your Current Organism:

Hordeum vulgare

NCBI taxonomy Id: 112509
Other names: H. vulgare subsp. vulgare, Hordeum sativum, Hordeum sativum Jess., Hordeum vulgare subsp. vulgare, Hordeum vulgare var. nudum, Hordeum vulgare var. nudum Spenn., Hordeum vulgare var. vulgare, domesticated barley, two-rowed barley

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A287FUE1	A0A287MRH6	A0A287FUE1	A0A287MRH6	Uncharacterized protein.	SAM_MPBQ_MSBQ_MT domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. MPBQ/MBSQ MT family.	0.956
A0A287FUE1	A0A287MX54	A0A287FUE1	A0A287MX54	Uncharacterized protein.	SAM_MPBQ_MSBQ_MT domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. MPBQ/MBSQ MT family.	0.956
A0A287FUE1	A0A287TPD6	A0A287FUE1	A0A287TPD6	Uncharacterized protein.	4-hydroxyphenylpyruvate dioxygenase.	0.444
A0A287FUE1	A0A287XT79	A0A287FUE1	A0A287XT79	Uncharacterized protein.	Uncharacterized protein.	0.976
A0A287FUE1	F2EBI3_HORVV	A0A287FUE1	F2EBI3	Uncharacterized protein.	Predicted protein.	0.400
A0A287FUE1	F2EEW2_HORVV	A0A287FUE1	F2EEW2	Uncharacterized protein.	Predicted protein.	0.969
A0A287GQZ2	A0A287XT79	A0A287GQZ2	A0A287XT79	Uncharacterized protein.	Uncharacterized protein.	0.895
A0A287GQZ2	F2E7J2_HORVV	A0A287GQZ2	F2E7J2	Uncharacterized protein.	Predicted protein.	0.885
A0A287GQZ2	F2EBI3_HORVV	A0A287GQZ2	F2EBI3	Uncharacterized protein.	Predicted protein.	0.922
A0A287GQZ2	F2EEW2_HORVV	A0A287GQZ2	F2EEW2	Uncharacterized protein.	Predicted protein.	0.895
A0A287MRH6	A0A287FUE1	A0A287MRH6	A0A287FUE1	SAM_MPBQ_MSBQ_MT domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. MPBQ/MBSQ MT family.	Uncharacterized protein.	0.956
A0A287MRH6	A0A287MX54	A0A287MRH6	A0A287MX54	SAM_MPBQ_MSBQ_MT domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. MPBQ/MBSQ MT family.	SAM_MPBQ_MSBQ_MT domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. MPBQ/MBSQ MT family.	0.942
A0A287MRH6	A0A287SMI4	A0A287MRH6	A0A287SMI4	SAM_MPBQ_MSBQ_MT domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. MPBQ/MBSQ MT family.	Uncharacterized protein.	0.956
A0A287MRH6	A0A287XT79	A0A287MRH6	A0A287XT79	SAM_MPBQ_MSBQ_MT domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. MPBQ/MBSQ MT family.	Uncharacterized protein.	0.961
A0A287MRH6	F2EBI3_HORVV	A0A287MRH6	F2EBI3	SAM_MPBQ_MSBQ_MT domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. MPBQ/MBSQ MT family.	Predicted protein.	0.432
A0A287MRH6	F2EEW2_HORVV	A0A287MRH6	F2EEW2	SAM_MPBQ_MSBQ_MT domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. MPBQ/MBSQ MT family.	Predicted protein.	0.962
A0A287MX54	A0A287FUE1	A0A287MX54	A0A287FUE1	SAM_MPBQ_MSBQ_MT domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. MPBQ/MBSQ MT family.	Uncharacterized protein.	0.956
A0A287MX54	A0A287MRH6	A0A287MX54	A0A287MRH6	SAM_MPBQ_MSBQ_MT domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. MPBQ/MBSQ MT family.	SAM_MPBQ_MSBQ_MT domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. MPBQ/MBSQ MT family.	0.942
A0A287MX54	A0A287SMI4	A0A287MX54	A0A287SMI4	SAM_MPBQ_MSBQ_MT domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. MPBQ/MBSQ MT family.	Uncharacterized protein.	0.956
A0A287MX54	A0A287XT79	A0A287MX54	A0A287XT79	SAM_MPBQ_MSBQ_MT domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. MPBQ/MBSQ MT family.	Uncharacterized protein.	0.961

page 1 of 4

Server load: low (30%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2024

Credits

Access

Info

About