STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F2CSS7_HORVVPredicted protein. (320 aa)    
Predicted Functional Partners:
M0W4X5_HORVV
BOWMAN_BIRK domain-containing protein.
   
    0.737
A0A287IB65
Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
     
 0.619
A0A287DTW9
BOWMAN_BIRK domain-containing protein.
   
  
 0.589
A0A287G051
BOWMAN_BIRK domain-containing protein.
   
  
 0.589
A0A287J7L5
PEROXIDASE_4 domain-containing protein; Belongs to the peroxidase family.
     
 0.581
A0A287TTJ6
Knot1 domain-containing protein; Belongs to the DEFL family.
   
   0.576
M0YEA8_HORVV
Uncharacterized protein.
   
  
0.556
A0A287DWV3
Glyco_hydro_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
     
 0.533
A0A287GZ99
Uncharacterized protein.
     
 0.533
A0A287GZC8
Uncharacterized protein.
     
 0.533
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 112509
Other names: H. vulgare subsp. vulgare, Hordeum sativum, Hordeum sativum Jess., Hordeum vulgare subsp. vulgare, Hordeum vulgare var. nudum, Hordeum vulgare var. nudum Spenn., Hordeum vulgare var. vulgare, domesticated barley, two-rowed barley
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.